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RFLP analysis of the partial 517-bp groEL gene amplicon digested with AluI and ApoI. The combined dendrogram was derived with <t>BioNumerics</t> software by using the unweighted pair group method with arithmetic averages and the Dice coefficient with 1% optimization and tolerance.
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RFLP analysis of the partial 517-bp groEL gene amplicon digested with AluI and ApoI. The combined dendrogram was derived with <t>BioNumerics</t> software by using the unweighted pair group method with arithmetic averages and the Dice coefficient with 1% optimization and tolerance.
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Image Search Results


RFLP analysis of the partial 517-bp groEL gene amplicon digested with AluI and ApoI. The combined dendrogram was derived with BioNumerics software by using the unweighted pair group method with arithmetic averages and the Dice coefficient with 1% optimization and tolerance.

Journal:

Article Title: Phylogenetic Analysis and PCR-Restriction Fragment Length Polymorphism Identification of Campylobacter Species Based on Partial groEL Gene Sequences

doi: 10.1128/JCM.42.12.5731-5738.2004

Figure Lengend Snippet: RFLP analysis of the partial 517-bp groEL gene amplicon digested with AluI and ApoI. The combined dendrogram was derived with BioNumerics software by using the unweighted pair group method with arithmetic averages and the Dice coefficient with 1% optimization and tolerance.

Article Snippet: The combined dendrogram was derived with BioNumerics software by using the unweighted pair group method with arithmetic averages and the Dice coefficient with 1% optimization and tolerance. table ft1 table-wrap mode="anchored" t5 TABLE 3. caption a7 Taxon Profile (fragment sizes [bp]) AluI ApoI C. lanienae CCUG 44467 T 1 (149, 129, 70, 65) 1 (320, 109, 87) C. fetus subsp. fetus CCUG 44789 2 (278, 147) 2 (352, 109) C. hyointestinalis subsp. hyointestinalis CCUG 14169 T 3 (109, 90, 84, 65) 2 (320, 109) C. hyointestinalis subsp. lawsonii CCUG 34538 T 3 (109, 90, 84, 65) 2 (320, 109) H. pylori 26695 4 (233, 148, 135) 3 (no cut sites) C. mucosalis CCUG 6822 T 5 (168, 129, 84, 65) 4 (228, 201) C. helveticus CCUG 30682 T 6 (252, 129, 65) 4 (228, 201) C. lari CCUG 23947 T 7a (252, 114, 81) 5 (239, 201) C. jejuni NCTC 11168 8a (266, 129, 81) 6 (222, 207) C. jejuni strain 6871 8b (266, 129, 90) 6 (222, 207) C. upsaliensis CCUG 14913 T 9a (155, 129, 112, 88) 7 (260, 201) C. coli CCUG 11283 T 10a (386, 70) 8 (207, 201) C. hyoilei CCUG 33450 T 10a (386, 70) 8 (207, 201) A. butzleri CCUG 10373 11 (284, 112, 102) 9 (321, 201) C. sputorum subsp. bubulus CCUG 11289 T 12 (109, 97, 84, 71, 60) 10 (228, 201, 87) C. sputorum biovar sputorum CCUG 9728 T 12 (109, 97, 84, 71, 60) 10 (228, 201, 87) C. rectus ATCC 33238 T ND b (252, 129, 121) ND (no cut sites) Open in a separate window a The groEL gene product was obtained by PCR with primers H60F and H60R1.

Techniques: Amplification, Derivative Assay, Software